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What the BIOME Trial Actually Measured, and Why Its Main Result Was Negative

Writer: Joyce Knieff, ND, LAc
Joyce Knieff, ND, LAc
Sep 24
6 min read

"Thirty plants a week" has become one of those numbers that circulates without anybody checking where it came from. I get asked about it constantly, usually by someone who has already bought a powder. A trial published this summer in the British Journal of Nutrition actually tested a version of the idea, and reading it carefully is more useful than the headline it produced.


Chopped assorted vegetables on a wooden cutting board
Photo: Yu Hosoi / Unsplash

What the BIOME trial tested and found


The BIOME study randomly assigned 399 adults aged 35 to 65 into three groups for six weeks [1]. Everyone in the study was eating under 20 grams of fiber a day when they started, which is low. One group took 30 grams a day of a whole-food plant blend containing more than 30 ingredients. A second group took 28 grams a day of bread croutons, matched for calories. A third took a probiotic. Three hundred forty-nine people finished, and self-reported adherence came in above 98 percent.


The primary question was whether the blend would shift people's gut bacteria toward species classified as favorable and away from species classified as unfavorable, using a proprietary ranking system.


It did not. The paper reports no significant difference between groups in the health ranks of the species that changed. That's the study's main outcome, and it came back negative.


What did happen is that a great deal changed. Compared with the crouton group, more than five thousand distinct bacterial groups shifted in relative abundance in the blend group over six weeks, and the blend also changed far more groups than the probiotic did. So the intervention plainly did something to the ecosystem. Whether that something was an improvement is precisely what the study couldn't establish.


On symptoms, people taking the blend reported less indigestion, less constipation, less heartburn, less flatulence, and more energy than the crouton group. Six adverse events were judged related to the products, and none were serious. A separate crossover sub-study found that adding the blend to a high-carbohydrate meal reduced hunger and increased fullness over the following three hours, with no measurable effect on blood sugar.


Three features of the design limit these results. Only the analysts were blinded to which group people were in, so participants knew whether they were eating a 30-ingredient plant blend or a bag of croutons. The symptom outcomes were self-reported by those unblinded participants, which is exactly the setup where what someone expects can change what they report. And most of the authors are employed by Zoe Limited, the company that makes the blend. That's disclosed in the paper and it's ordinary for industry-funded nutrition research. It still means an independent group should replicate this before anyone treats it as settled.


Other fiber trials that missed their primary microbiome outcomes


Fiber interventions missing their primary microbiome endpoint is a recurring result rather than an outlier.


A 2025 crossover trial gave 56 adults with low baseline fiber intake a rice bran bread that more than doubled their fiber, from about 21 grams a day to about 43 [2]. Its primary outcome, a composite of key fiber-fermenting bacteria, showed no significant difference after correction for multiple comparisons. Several individual bacteria shifted in the expected direction before correction. The cholesterol profile improved. The microbiome endpoint the study was built around did not.


A 17-week Stanford trial compared a high-fiber diet against a high-fermented-food diet in healthy adults [3]. The fermented-food arm steadily increased microbial diversity and lowered inflammatory markers. The high-fiber arm left community diversity essentially stable, though it did increase the microbiome's enzymatic machinery for breaking down plant sugars. The trial's own primary outcome, a cytokine response score, was unchanged in both arms.


A 2026 crossover trial substituting plant protein for animal protein in men at cardiometabolic risk found the same kind of result: overall diversity unchanged, specific taxa and tryptophan metabolites shifted [4].


The pattern across all four is consistent. Feeding people more and more varied plants changes what their gut bacteria are doing. It does not reliably produce the tidy "more diversity, better score" outcome that microbiome marketing promises, and part of the problem is that nobody has agreed on what a good microbiome score should even measure.


Why these results may not apply to a sensitive gut


This topic is central to my clinical work, and the symptom results are the ones I would be most cautious about generalizing. Thirty grams a day of a highly fermentable, 30-plus-ingredient plant blend, given to people who had been eating almost no fiber, produced fewer reports of flatulence and constipation rather than more.


That is not what I see in clinic. When someone with small intestinal bacterial overgrowth (SIBO), slow gut motility, or long-standing bloating escalates their fiber intake that fast, gas and distension usually get worse before anything gets better. The mechanism is well described: short-chain fermentable carbohydrates draw water into the small intestine and generate gas in the colon, and in people with visceral hypersensitivity (heightened pain sensitivity in the gut) that combination produces symptoms [5].


So why the difference? Population. The BIOME participants were healthy adults with body weights in a broad but ordinary range and no gut diagnosis required for entry. Healthy guts handle a fiber escalation that a sensitized gut does not. A result in the first group is a poor guide to the second, and the people most likely to buy a gut-health powder are often the people in the second.


The principle behind all this is older than the trial. Diversity of plants beats a single isolated fiber. A blend of more than 30 whole-food ingredients is closer to how humans have always eaten than any purified supplement, and the polyphenols and micronutrients that come with the fiber plausibly account for some of the effect. That principle doesn't require a proprietary product, and it doesn't require a score.


How to add fiber if yours is low


If you're eating under 20 grams of fiber a day, more plant variety is a reasonable change, and you can get it at a grocery store. Beans, nuts, seeds, whole grains, herbs, and a wider rotation of vegetables all count toward the same thing the blend was made of.


Go slowly. This trial ran six weeks at a fixed 30 grams a day in people without gut disease. Slow escalation is the standard clinical approach, and the gas and distension described above are the reason.


If you have IBS, SIBO, gastroparesis (delayed stomach emptying), or a history of bloating that reliably worsens with vegetables, don't take this trial as permission to increase fiber quickly. Talk with someone who can sequence motility, overgrowth, and fiber in the right order. In my experience, fiber added before motility is addressed tends to make symptoms worse.


Treat "microbiome health scores" with skepticism, including the one used here. The trial that used it didn't meet its primary outcome on it, and the field has no agreed standard for what those scores should contain.


References


  1. Creedon AC, Bernard HM, Amati F, Segata N, Wallace SM, Arrè A, Smith HA, Platts A, Bulsiewicz WJ, Bermingham KM, et al. Does a diverse whole-food plant-based dietary intervention improve gut microbiome composition, gut symptoms, energy and hunger in healthy adults? A randomised controlled trial. Br J Nutr. 2026:1-19. PMID: 42423005. DOI: 10.1017/S0007114526107703. Original link from the digest: https://pubmed.ncbi.nlm.nih.gov/42423005/

  2. Ng HM, Maggo J, Wall CL, Bayer SB, Mullaney JA, Cabrera D, Fraser K, Cooney JM, Günther CS, McNabb WC, Foster M, Frampton C, Gearry RB, Roy NC. Effects of defatted rice bran-fortified bread on gut microbiome, cardiovascular risk, gut discomfort, wellbeing and gut physiology in healthy adults with low dietary fibre intake. Clin Nutr ESPEN. 2025;67:362-376. PMID: 40127766. DOI: 10.1016/j.clnesp.2025.03.045

  3. Wastyk HC, Fragiadakis GK, Perelman D, et al. Gut-microbiota-targeted diets modulate human immune status. Cell. 2021;184(16):4137-4153.e14. PMID: 34256014. DOI: 10.1016/j.cell.2021.06.019

  4. Lépine G, Davila AM, Cueff G, et al. Increasing plant protein sources in the diet modulates gut microbiota and tryptophan metabolism in men at cardiometabolic risk. Gut Microbes. 2026;18(1):2677951. PMID: 42199008. DOI: 10.1080/19490976.2026.2677951

  5. Staudacher HM, Whelan K. The low FODMAP diet: recent advances in understanding its mechanisms and efficacy in IBS. Gut. 2017;66(8):1517-1527. PMID: 28592442. DOI: 10.1136/gutjnl-2017-313750


Supporting references retrieved from PubMed. Reference titles keep the spelling used by the publishing journal.



This article is educational and is not medical advice. It doesn't replace working with a clinician who knows your full history. If you have a diagnosed digestive condition, plan changes to your fiber intake with your provider rather than testing them on your own.



If this resonates with what you're experiencing and you'd like to explore a naturopathic approach, book a consultation with our clinic.




 
 
 

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